Aging-TCA

Select Gene and Sample

Select Old Sample

Choose Gene:

Select Gene and Sample

Select Young Sample

Choose Gene:

Feature plot
Violin Plot

Feature plot
Violin Plot

UMAP
UMAP

UMAP
UMAP

Select Gene and Sample

Select Old Sample

Choose Gene:

Select Gene and Sample

Select Young Sample

Choose Gene:

Feature plot
Violin Plot

Feature plot
Violin Plot

UMAP
UMAP

UMAP
UMAP

Select Gene and Sample

Select Old Sample

Choose Gene:

Select Gene and Sample

Select Young Sample

Choose Gene:

Feature plot
Violin Plot

Feature plot
Violin Plot

UMAP
UMAP

UMAP
UMAP

Select Gene and Sample

Select Old Age Sample

Choose Gene:

Select Gene and Sample

Select Young-Middle Age Sample

Choose Gene:

Feature plot
Violin Plot

Feature plot
Violin Plot

UMAP
UMAP

UMAP
UMAP

Select Gene

Choose Gene:

Download Volcano Download DEG Table

Select Gene

Choose Gene:

Download Volcano Download DEG Table

Select Gene

Choose Gene:

Download Volcano Download DEG Table

Select Gene

Choose Gene:

Choose Celltpye

select emitter_receiver

select ligands or receptors

Choose Net Type

Old net

Young net

Choose Net

Choose Celltpye

select emitter_receiver

select ligands or receptors

Choose Net Type

Old net

Young net

Choose Net

Choose Celltpye

select emitter_receiver

select ligands or receptors

Choose Net Type

Old net

Young net

Choose Net

Huamn - Old

choose module：

Human - Young

choose module：

Monkey - Old

choose module：

Monkey - Young

choose module：

Mouse - Old

choose module：

Mouse - Young

choose module：

Zebrafish - Old

choose module：

Zebrafish - Young

choose module：

UP
DOWN

UP
Down

Up
Down

Up
Down

Human_Gene:

Human pseudotime trajectory

Gene:

Monkey pseudotime trajectory

Gene:

Mouse pseudotime trajectory

Gene:

Zebrafish pseudotime trajectory

Gene:

DownMarker

Choose Marker File

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Please upload the Marker Gene File generated by the FindMarker function.

Species selection

Human

Mouse

Monkey

Zebrafish

Download Example Files

UMAP File input

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Please upload the UMAP coordinate file containing XY coordinates for each cell.

Old Sample

Select Old Sample

Choose Gene:

Young Sample

Select Young Sample

Choose Gene:

transcriptomics

transcriptomics2

transcriptomics3
transcriptomics

transcriptomics4
transcriptomics

Download (csv)

Select Cell Type

Choose Gene:

Download Alternatives 1

Time series
Time series

Top CO-expression gene
Top CO-expression gene

Sample Selection

Select Sample

Choose Gene:

Download Alternatives 1

Sample Selection

Select Sample

Choose Gene:

Download Alternatives 2

Feature plot
Violin Plot

Feature plot
Violin Plot

UMAP
UMAP

UMAP
UMAP

Help and Support

Q:What's the format of input files for testicular cell-type autoidenttification?

A:The input markers file (markers.tsv) has the following column names: p_val, avg_log2FC, pct.1, pct.2, p_val_adj, cluster, gene. The input UMAP file (umap.txt) contains the following column names: UMAP_1, UMAP_2, cell_type.

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